It’s a sunny day in Southern California and the developers of FreeSurfer—a suite of software tools for the analysis of neuroimaging data—are preparing for a training session to introduce scientists to the many benefits of the package. To help the scientists find the classroom they have hung “Free...
Search Results: Software%20Development
New Software Improves Ability to Determine the Cause of Stroke
Determining the cause of an ischemic stroke is critical to preventing a second one and is a primary focus in the evaluation of stroke patients. But for all the importance of identifying the cause, physicians have long lacked a robust and objective means to do so. Now a team of investigators at...
New Software Concept Promises Boost for Clinical Trial Recruitment
What if you held a clinical trial and nobody came? While plenty of patients are eager to participate, researchers often have difficulty reaching their target enrollments for clinical trials, the goal of which is to determine the safety and efficacy of new drugs or therapies before they are bro...
Caroline Magnain Joins $17 Million Initiative to Bring More Optical Imaging Expertise to Biomedical Research
The Chan Zuckerberg Initiative (CZI) has announced the Martinos Center's Caroline Magnain as one of 17 CZI investigators— engineers, physicists, mathematicians, computer scientists, and biologists with expertise in technology development — participating in a $17 million Imaging Scientists program...
Computational Services
Computing Facilities The Center’s IT infrastructure consists of over 400 CentOS Linux workstations and 150 Windows and Macintosh desktops in offices and labs owned by individual research groups. There is a server farm with over 50 Linux servers that handles central storage, email, web, print, s...
Magnetic Resonance Imaging
The Center's magnetic resonance imaging (MRI) facilities include the following. Large-bore MRI Systems * All subject bays are equipped with Blu-ray/DVD players for subject entertainment Bay 1: Siemens 3T MRI Skyra with 128ch receive capabilities and 2ch pTx This is a Siemens 3T Skyra wit...
Mainak Jas
Dr. Jas completed his PhD from Telecom ParisTech. His thesis focused on automating MEG/EEG analysis pipelines. He is a proponent of open and reproducible science. He has been a key contributor to several open source neuroimaging tools: most notably MNE-Python, MNE-BIDS, and HNN-core. He develope...
Douglas Greve
Douglas Greve, PhD, has a passion for delivering cutting-edge tools to the neuroscience community. He joined the FreeSurfer team 20 years ago and has been developing neuroimaging software ever since. His career has offered him an exciting mixture of engineering, physics, software development and ...
Martinos Responds: ‘Community Help’ Website Brings People Together During a Time of Crisis
As healthcare challenges stemming from the COVID-19 pandemic continue to mount, and patient care and hospital operations schedules grow increasingly busy, many direct care providers are finding ineeds t difficult to keep up with needs at home—grocery shopping, pet care or any number of other resp...
Caroline Magnain
Dr. Magnain is an assistant professor in Radiology at Harvard Medical School and assistant in physics at Massachusetts General Hospital in Boston. Throughout her career, she has strived to apply optical imaging to various domains, from cultural heritage to the biomedical science, and has develope...
Bruce Fischl
Bruce Fischl, PhD, is a Professor of Radiology at Harvard Medical School and Director of the Laboratory for Computational Neuroimaging at the Martinos Center for Biomedical Imaging. A leader in the field of image processing and analysis, he has spearheaded the development of a range of innovative...
Robert Barry
Dr. Barry's research aims to maximize the utility of high-field MR scanners to improve our understanding of central nervous system function and networks in normal and pathological populations. A focus of this work has been on the development and validation of methods for the acquisition, processi...
Stephen Cauley
Stephen Cauley, PhD, is an Assistant Professor of Radiology at Harvard Medical School. He received his BS and PhD in Electrical & Computer Engineering (ECE) from Purdue University. Prior to joining the A.A. Martinos Center for Biomedical Imaging he held positions as a Visiting Assistant Profe...
Karl Helmer
Karl Helmer, PhD, maintains research interests in several areas: (1) the creation of data management and sharing infrastructure; (2) the development of imaging protocols for multi-site MR imaging-based studies; (3) the creation of quality control and assessment software for MRI data; and (4) deve...
Paul Raines
Paul Raines, PhD, was initially hired at the center as a scientific programmer in the Freesurfer group. Within his first year he took over management of all of the Center's computational infrastructure. He now manages a group of four IT specialists that maintains over 400 Linux analysis workstati...
Matti Hämäläinen
Matti Hämäläinen is a Professor of Radiology at Harvard Medical School and Director of the David Cohen Magnetoencephalography (MEG) Laboratory at the Department of Radiology, Massachusetts General Hospital. He is one of the pioneers in the application of MEG in conjunction with other non-invasive...
Fang Liu
Fang Liu is the Director of the Intelligent Imaging Innovation and Translation Lab at Athinoula A. Martinos Center for Biomedical Imaging and Assistant Professor of Radiology at Harvard Medical School. His research focuses on medical image acquisition and reconstruction, image analysis and proces...
Martin Reuter
Dr. Martin Reuter is an Assistant Professor of Radiology and of Neurology at Harvard Medical School and the Massachusetts General Hospital (Assistant in Neuroscience, Dept. of Radiology and Dept. of Neurology). He is affiliated with the Martinos Center for Biomedical Imaging and the German Center...
Christopher Bridge
Dr Bridge is trained as an engineer, with MEng (Distinction) and DPhil degrees from the University of Cambridge and University of Oxford, respectively. He has worked in the area of medical image analysis for nearly a decade. His work on his doctoral thesis involved the development of a system for...
Visualizing the Mind: How We See the Brain Through Functional MRI
Last year, Harvard College senior Kelsey Ichikawa (shown in the photo above) interviewed the Martinos Center’s Bruce Rosen and Bruce Fischl for a general audience article about functional MRI, which she was writing for a science journalism course. Earlier this year, the article won the Harvard Bo...