Software:
(Siemens VE11) pulse sequences:
High resolution diffusion imaging with gSlider-SMS:
[select "gSlider" from the drop-down list]
[PDF]
Quantitative T1, T2 mapping at high resolution using 3D MR Fingerprinting:
[select "3D MRF" from the drop-down list]
[PDF]
Machine learning:
Wave-MODL: Wave-Encoded Model-Based Deep Learning:
[Python code]
[ISMRM abstract]
eRAKI: Fast Robust Artificial neural networks for K‐space Interpolation:
[Python code]
[ISMRM abstract]
Scan-specific, Parameter-free Artifact Reduction in K-space (SPARK):
[Python code for the ISMRM abstract]
[ISMRM abstract]
[Python code for the MRM paper]
[MRM preprint]
Accelerated Multi-shot EPI through Machine Learning and Joint Reconstruction:
[Data & Python code for Keras]
[PDF]
Distortion-free Echo Planar Imaging:
VUDU: motion-robust, distortion-free multi-shot EPI:
[Matlab code]
[ISMRM abstract]
T2-BUDA-gSlider: rapid high resolution T2 mapping with blip-up/down acquisition, gSlider and subspace reconstruction:
[Matlab code]
[preprint]
Parallel imaging and compressed sensing:
VC-MUSSELS: Hankel low-rank regularization for multi-shot EPI with virtual coils for high-fidelity partial Fourier reconstruction:
[HTML]
[Matlab code]
Calibrationless parallel imaging for multi echo/contrast data: [Matlab code] [HTML]
Joint Reconstruction:
Joint SENSE for faster multi-contrast imaging:
[Matlab code]
[PDF]
J-LORAKS and JVC-GRAPPA: Improving parallel imaging by jointly reconstructing multi-contrast data:
[Matlab code]
[PDF]
Joint L1-SPIRiT reconstruction for phase-cycled balanced SSFP: [Matlab code] [HTML]
Joint GRAPPA reconstruction for phase-cycled balanced SSFP: [Matlab code] [PDF]
Multicontrast reconstruction with Bayesian Compressed Sensing: [Matlab code] [PDF]
Bayesian Compressed Sensing reconstruction with prior estimate: [Matlab code] [PDF]
Wave-CAIPI:
Simultaneous Time Interleaved MultiSlice (STIMS) with Compressed Sensing Wave:
[Matlab code]
[PDF]
Wave-CAIPI for Simultaneous MultiSlice RARE/Turbo Spin Echo: [Matlab code] [PDF]
Wave-CAIPI for highly accelerated 3D Gradient Echo imaging: [Matlab code] [PDF]
Receiver coil combination without reference data:
Block Coil Compression (BCC) for reference-free coil combination at ultra high field: [Matlab code] [PDF]
SVD for reference-free coil combination at high field: [Matlab code] [HTML]
Quantitative Susceptibility Mapping (QSM):
Dipole Inversion Algorithms:
BM4D QSM:
[ISMRM'20 talk]
[Matlab code]
Nonlinear Dipole Inversion (NDI) enables robust QSM:
[preprint]
[Matlab code]
Fast Total Generalized Variation regularized QSM:
[Matlab code] [PDF]
Multi-orientation COSMOS QSM and Susceptibility Tensor Imaging:
[Matlab code] [PDF]
Fast l1-Regularized QSM with Magnitude Weighting and SHARP background filtering:
[Matlab code] [PDF]
l1- and l2-Regularized QSM and PDF background filtering: [Matlab code] [PDF]
Closed-form l2-Regularized QSM: [Matlab code] [PDF]
Single-Step QSM:
with Total Generalized Variation regularization:
[Matlab code] [PDF] [HTML]
with l2-Regularization:
[Matlab code] [PDF]
Demos and Recon Challenges:
Data and code for the QSM Reconstruction Challenge 2.0:
[Matlab code]
[MRM paper]
ISMRM demo including Fast Algorithm for Nonlinear Susceptibility Inversion (FANSI):
[Matlab code]
[PDF]
Data and code for the QSM Reconstruction Challenge 1.0:
[Matlab code]
[PDF] [HTML]
MR Spectroscopic Imaging:
Fast lipid suppression with l2-regularization: [Matlab code] [PDF]
Lipid suppression with spatial priors and l1-regularization: [Matlab code] [PDF]
Accelerated Diffusion Spectrum Imaging:
Fast Diffusion Spectrum Imaging reconstruction with trained dictionaries: [Matlab code] [PDF]
Diffusion Spectrum Imaging with dictionary reconstruction: [Matlab code] [PDF]
[Python code for the MRM paper] [MRM preprint]
